Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.94■□□□□ 0.94
SRLQ86TD4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SRLQ86TD4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.94■□□□□ 0.94
SRLQ86TD4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.94■□□□□ 0.94
SRLQ86TD4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.94■□□□□ 0.94
SRLQ86TD4 AC016405.3-201ENST00000607710 860 ntBASIC20.94■□□□□ 0.94
SRLQ86TD4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.94■□□□□ 0.94
SRLQ86TD4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.94■□□□□ 0.94
SRLQ86TD4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRLQ86TD4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SRLQ86TD4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRLQ86TD4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRLQ86TD4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SRLQ86TD4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRLQ86TD4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRLQ86TD4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRLQ86TD4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SRLQ86TD4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.93■□□□□ 0.94
SRLQ86TD4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.93■□□□□ 0.94
SRLQ86TD4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
SRLQ86TD4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.93■□□□□ 0.94
SRLQ86TD4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 AC007322.3-201ENST00000426526 701 ntBASIC20.93■□□□□ 0.94
SRLQ86TD4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.93■□□□□ 0.94
SRLQ86TD4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.93■□□□□ 0.94
SRLQ86TD4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.93■□□□□ 0.94
SRLQ86TD4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SRLQ86TD4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SRLQ86TD4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SRLQ86TD4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.93■□□□□ 0.94
SRLQ86TD4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRLQ86TD4 AC116050.2-201ENST00000612102 1779 ntBASIC20.92■□□□□ 0.94
SRLQ86TD4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SRLQ86TD4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SRLQ86TD4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SRLQ86TD4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.92■□□□□ 0.94
SRLQ86TD4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SRLQ86TD4 AC069236.1-201ENST00000604339 616 ntBASIC20.92■□□□□ 0.94
SRLQ86TD4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.92■□□□□ 0.94
SRLQ86TD4 AC008694.1-202ENST00000636953 945 ntBASIC20.92■□□□□ 0.94
SRLQ86TD4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.92■□□□□ 0.94
SRLQ86TD4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRLQ86TD4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SRLQ86TD4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SRLQ86TD4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.91■□□□□ 0.94
SRLQ86TD4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.91■□□□□ 0.94
SRLQ86TD4 NCF1B-203ENST00000435988 1254 ntBASIC20.91■□□□□ 0.94
SRLQ86TD4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.91■□□□□ 0.94
SRLQ86TD4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
SRLQ86TD4 RARRES2P4-201ENST00000514074 484 ntBASIC20.91■□□□□ 0.94
SRLQ86TD4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.91■□□□□ 0.94
SRLQ86TD4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.91■□□□□ 0.94
SRLQ86TD4 AC133552.2-202ENST00000575694 574 ntBASIC20.91■□□□□ 0.94
SRLQ86TD4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.91■□□□□ 0.94
SRLQ86TD4 FAM21FP-204ENST00000608637 956 ntBASIC20.91■□□□□ 0.94
SRLQ86TD4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.91■□□□□ 0.94
SRLQ86TD4 OR10C1-204ENST00000622521 1039 ntBASIC20.91■□□□□ 0.94
SRLQ86TD4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.91■□□□□ 0.94
SRLQ86TD4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.91■□□□□ 0.94
SRLQ86TD4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRLQ86TD4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SRLQ86TD4 AC093503.3-201ENST00000624917 2352 ntBASIC20.9■□□□□ 0.94
SRLQ86TD4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 AC020907.5-201ENST00000624372 1936 ntBASIC20.9■□□□□ 0.94
SRLQ86TD4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.9■□□□□ 0.94
SRLQ86TD4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.9■□□□□ 0.94
SRLQ86TD4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRLQ86TD4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.9■□□□□ 0.94
SRLQ86TD4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SRLQ86TD4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms