Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 FAM201B-201ENST00000458407 597 ntBASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 KRT16P6-202ENST00000425692 1426 ntBASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 UNC93B4-201ENST00000505679 747 ntBASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD3Q7Z3D4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 AP003097.1-201ENST00000530657 1135 ntBASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 AC008403.3-201ENST00000598924 454 ntBASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD3Q7Z3D4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 AC124283.5-201ENST00000624661 1809 ntBASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 AC008687.6-201ENST00000596318 630 ntBASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.95■□□□□ 0.78
LYSMD3Q7Z3D4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms