Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHFQ7M4L6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHFQ7M4L6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 AC097381.1-201ENST00000429019 1296 ntBASIC17.92■□□□□ 0.46
SHFQ7M4L6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.92■□□□□ 0.46
SHFQ7M4L6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHFQ7M4L6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 PGM5P4-201ENST00000421970 445 ntBASIC17.91■□□□□ 0.46
SHFQ7M4L6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHFQ7M4L6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.91■□□□□ 0.46
SHFQ7M4L6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 AC020763.4-201ENST00000623414 4170 ntBASIC17.9■□□□□ 0.46
SHFQ7M4L6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.9■□□□□ 0.46
SHFQ7M4L6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHFQ7M4L6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms