Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PPP4R3CPQ6ZMV5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 FEM1AP1-201ENST00000431297 1995 ntBASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 AL445669.2-201ENST00000454425 421 ntBASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R3CPQ6ZMV5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC007322.3-201ENST00000426526 701 ntBASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 MIR4758-201ENST00000577688 71 ntBASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC040904.1-201ENST00000590850 223 ntBASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC092118.2-201ENST00000613495 667 ntBASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC133041.1-202ENST00000642053 222 ntBASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC007225.1-201ENST00000566331 1836 ntBASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PPP4R3CPQ6ZMV5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 MGST3-204ENST00000367888 778 ntTSL 3 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 PRELID3BP7-201ENST00000503606 469 ntBASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC098934.4-201ENST00000564127 592 ntBASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 LINC01521-201ENST00000504184 1943 ntBASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R3CPQ6ZMV5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 HSFY4P-201ENST00000415994 1181 ntBASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 AC116050.2-201ENST00000612102 1779 ntBASIC22.66■■□□□ 1.22
PPP4R3CPQ6ZMV5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3CPQ6ZMV5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms