Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 AC069544.1-201ENST00000609399 999 ntBASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFWD3Q6PCD5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.71■□□□□ 0.91
RFWD3Q6PCD5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
RFWD3Q6PCD5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
RFWD3Q6PCD5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RFWD3Q6PCD5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
RFWD3Q6PCD5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 AC124283.5-201ENST00000624661 1809 ntBASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 AL158047.1-201ENST00000445918 881 ntBASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD3Q6PCD5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 SMG8-203ENST00000578922 2178 ntBASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 GCSHP5-201ENST00000443090 522 ntBASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 AC142381.4-202ENST00000563973 229 ntBASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD3Q6PCD5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms