Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
RTL6Q6ICC9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL6Q6ICC9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.94■□□□□ 0.46
RTL6Q6ICC9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 AC124283.5-201ENST00000624661 1809 ntBASIC17.93■□□□□ 0.46
RTL6Q6ICC9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 TSPY7P-201ENST00000431358 1114 ntBASIC17.93■□□□□ 0.46
RTL6Q6ICC9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.93■□□□□ 0.46
RTL6Q6ICC9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 AL049637.2-201ENST00000641778 930 ntBASIC17.93■□□□□ 0.46
RTL6Q6ICC9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL6Q6ICC9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 AC073912.3-201ENST00000624414 853 ntBASIC17.92■□□□□ 0.46
RTL6Q6ICC9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTL6Q6ICC9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL6Q6ICC9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms