Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
SEL1L3Q68CR1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 KRT17P3-201ENST00000420566 1262 ntBASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 AC006557.6-201ENST00000623071 864 ntBASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 MIR2861-201ENST00000636310 90 ntBASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEL1L3Q68CR1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 AC069544.1-201ENST00000609399 999 ntBASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEL1L3Q68CR1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 FP700111.2-201ENST00000619190 1892 ntBASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SEL1L3Q68CR1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms