Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 SLC25A1P4-201ENST00000567977 778 ntBASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 AC018553.1-201ENST00000616682 1458 ntBASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 AP002982.1-201ENST00000492365 877 ntBASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 NAPSB-206ENST00000562112 1266 ntBASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
VPS13DQ5THJ4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 AC117947.1-201ENST00000427448 529 ntBASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 EGLN1P1-201ENST00000531623 762 ntBASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 AP000692.2-201ENST00000608391 879 ntBASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13DQ5THJ4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 AP000550.4-202ENST00000639755 178 ntBASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 AC010203.1-204ENST00000548782 407 ntBASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 AC026396.1-201ENST00000419388 421 ntBASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 AC022616.7-201ENST00000525383 220 ntBASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 FEM1AP4-201ENST00000443167 1987 ntBASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13DQ5THJ4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 RCC2P6-201ENST00000526625 1557 ntBASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 Z85996.1-201ENST00000494644 937 ntBASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 EP400NL-214ENST00000641289 2402 ntBASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13DQ5THJ4 AL023803.3-201ENST00000615559 522 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms