Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39AQ5SRH9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39AQ5SRH9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC39AQ5SRH9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 AC093827.2-201ENST00000512654 315 ntBASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 AP006294.2-201ENST00000641667 209 ntBASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TTC39AQ5SRH9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 AL157384.1-201ENST00000445995 2473 ntBASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 AC110285.5-201ENST00000611501 352 ntBASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TTC39AQ5SRH9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 MME-217ENST00000616757 1315 ntTSL 5 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.22■■□□□ 1.47
TTC39AQ5SRH9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 LINC01006-201ENST00000333319 2292 ntBASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TTC39AQ5SRH9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TTC39AQ5SRH9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TTC39AQ5SRH9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
TTC39AQ5SRH9 NBPF21P-201ENST00000425093 1451 ntBASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 AL162377.1-201ENST00000618844 1793 ntBASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 PHGDH-210ENST00000641115 1638 ntBASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 AC116351.2-201ENST00000606540 1585 ntBASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 AC018553.1-201ENST00000616682 1458 ntBASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TTC39AQ5SRH9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms