Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 KRT16P6-202ENST00000425692 1426 ntBASIC20.71■□□□□ 0.91
RAB6CQ53S08 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 KRT18P6-201ENST00000555540 1265 ntBASIC20.71■□□□□ 0.91
RAB6CQ53S08 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 SOX15-203ENST00000570788 1093 ntBASIC20.71■□□□□ 0.91
RAB6CQ53S08 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB6CQ53S08 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RAB6CQ53S08 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAB6CQ53S08 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RAB6CQ53S08 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB6CQ53S08 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 AC008403.3-201ENST00000598924 454 ntBASIC20.69■□□□□ 0.9
RAB6CQ53S08 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RAB6CQ53S08 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB6CQ53S08 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.68■□□□□ 0.9
RAB6CQ53S08 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB6CQ53S08 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB6CQ53S08 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB6CQ53S08 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.68■□□□□ 0.9
RAB6CQ53S08 MIR4651-201ENST00000582622 73 ntBASIC20.68■□□□□ 0.9
RAB6CQ53S08 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB6CQ53S08 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
RAB6CQ53S08 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB6CQ53S08 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB6CQ53S08 AL390719.1-204ENST00000412397 1219 ntBASIC20.67■□□□□ 0.9
RAB6CQ53S08 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB6CQ53S08 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB6CQ53S08 RPS2P52-201ENST00000469610 820 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms