Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.85■□□□□ 0.29
C4orf46Q504U0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.85■□□□□ 0.29
C4orf46Q504U0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.85■□□□□ 0.29
C4orf46Q504U0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.85■□□□□ 0.29
C4orf46Q504U0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.85■□□□□ 0.29
C4orf46Q504U0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C4orf46Q504U0 SYT6-210ENST00000641643 1587 ntBASIC16.85■□□□□ 0.29
C4orf46Q504U0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
C4orf46Q504U0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 AC005332.8-201ENST00000622750 2735 ntBASIC16.84■□□□□ 0.29
C4orf46Q504U0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.84■□□□□ 0.29
C4orf46Q504U0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
C4orf46Q504U0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
C4orf46Q504U0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.83■□□□□ 0.29
C4orf46Q504U0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf46Q504U0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf46Q504U0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf46Q504U0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
C4orf46Q504U0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
C4orf46Q504U0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.83■□□□□ 0.28
C4orf46Q504U0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.83■□□□□ 0.28
C4orf46Q504U0 LINC01465-201ENST00000408887 1940 ntBASIC16.83■□□□□ 0.28
C4orf46Q504U0 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.83■□□□□ 0.28
C4orf46Q504U0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 AC239859.2-201ENST00000444165 318 ntBASIC16.83■□□□□ 0.28
C4orf46Q504U0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.83■□□□□ 0.28
C4orf46Q504U0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
C4orf46Q504U0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.83■□□□□ 0.28
C4orf46Q504U0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C4orf46Q504U0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.82■□□□□ 0.28
C4orf46Q504U0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.82■□□□□ 0.28
C4orf46Q504U0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.82■□□□□ 0.28
C4orf46Q504U0 SLC47A1P1-202ENST00000449666 945 ntBASIC16.82■□□□□ 0.28
C4orf46Q504U0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.82■□□□□ 0.28
C4orf46Q504U0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.82■□□□□ 0.28
C4orf46Q504U0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.82■□□□□ 0.28
C4orf46Q504U0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 MIR2861-201ENST00000636310 90 ntBASIC16.82■□□□□ 0.28
C4orf46Q504U0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf46Q504U0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms