Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.43□□□□□ -0.42
HSPG2P98160 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HSPG2P98160 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC12.43□□□□□ -0.42
HSPG2P98160 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HSPG2P98160 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HSPG2P98160 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HSPG2P98160 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.42□□□□□ -0.42
HSPG2P98160 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.42□□□□□ -0.42
HSPG2P98160 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.42□□□□□ -0.42
HSPG2P98160 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HSPG2P98160 AL031008.1-201ENST00000619963 541 ntBASIC12.42□□□□□ -0.42
HSPG2P98160 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
HSPG2P98160 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC12.42□□□□□ -0.42
HSPG2P98160 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC12.42□□□□□ -0.42
HSPG2P98160 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
HSPG2P98160 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.42□□□□□ -0.42
HSPG2P98160 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HSPG2P98160 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HSPG2P98160 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HSPG2P98160 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.41□□□□□ -0.42
HSPG2P98160 AC116562.4-202ENST00000641738 218 ntBASIC12.41□□□□□ -0.42
HSPG2P98160 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
HSPG2P98160 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HSPG2P98160 PRSS44-201ENST00000515154 1146 ntBASIC12.41□□□□□ -0.42
HSPG2P98160 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HSPG2P98160 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
HSPG2P98160 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HSPG2P98160 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 CCR12P-201ENST00000446203 998 ntBASIC12.41□□□□□ -0.42
HSPG2P98160 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.41□□□□□ -0.42
HSPG2P98160 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HSPG2P98160 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HSPG2P98160 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.4□□□□□ -0.42
HSPG2P98160 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.4□□□□□ -0.42
HSPG2P98160 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.4□□□□□ -0.42
HSPG2P98160 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HSPG2P98160 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.4□□□□□ -0.42
HSPG2P98160 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.4□□□□□ -0.42
HSPG2P98160 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HSPG2P98160 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HSPG2P98160 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.4□□□□□ -0.42
HSPG2P98160 SLC25A6P4-201ENST00000586535 553 ntBASIC12.4□□□□□ -0.42
HSPG2P98160 LINC02084-201ENST00000606069 1096 ntBASIC12.4□□□□□ -0.42
HSPG2P98160 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC12.4□□□□□ -0.42
HSPG2P98160 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HSPG2P98160 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
HSPG2P98160 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC12.4□□□□□ -0.42
HSPG2P98160 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HSPG2P98160 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HSPG2P98160 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HSPG2P98160 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.39□□□□□ -0.43
HSPG2P98160 AP002383.4-201ENST00000442518 975 ntBASIC12.39□□□□□ -0.43
HSPG2P98160 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HSPG2P98160 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HSPG2P98160 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.39□□□□□ -0.43
HSPG2P98160 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.39□□□□□ -0.43
HSPG2P98160 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HSPG2P98160 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
HSPG2P98160 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.39□□□□□ -0.43
HSPG2P98160 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 ME2-206ENST00000638410 2289 ntTSL 5 BASIC12.39□□□□□ -0.43
HSPG2P98160 ME2-210ENST00000639255 2262 ntTSL 5 BASIC12.39□□□□□ -0.43
HSPG2P98160 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HSPG2P98160 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.39□□□□□ -0.43
HSPG2P98160 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
HSPG2P98160 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms