Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.84■□□□□ 0.93
CBX1P83916 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CBX1P83916 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CBX1P83916 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.83■□□□□ 0.93
CBX1P83916 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CBX1P83916 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CBX1P83916 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.83■□□□□ 0.93
CBX1P83916 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CBX1P83916 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CBX1P83916 MIR7108-201ENST00000614319 87 ntBASIC20.83■□□□□ 0.93
CBX1P83916 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.83■□□□□ 0.92
CBX1P83916 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CBX1P83916 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.83■□□□□ 0.92
CBX1P83916 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CBX1P83916 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CBX1P83916 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CBX1P83916 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CBX1P83916 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CBX1P83916 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CBX1P83916 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CBX1P83916 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CBX1P83916 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.81■□□□□ 0.92
CBX1P83916 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.81■□□□□ 0.92
CBX1P83916 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.81■□□□□ 0.92
CBX1P83916 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.81■□□□□ 0.92
CBX1P83916 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.81■□□□□ 0.92
CBX1P83916 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CBX1P83916 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.81■□□□□ 0.92
CBX1P83916 AIRN-201ENST00000601203 4374 ntBASIC20.81■□□□□ 0.92
CBX1P83916 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.8■□□□□ 0.92
CBX1P83916 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CBX1P83916 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.8■□□□□ 0.92
CBX1P83916 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.8■□□□□ 0.92
CBX1P83916 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.8■□□□□ 0.92
CBX1P83916 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CBX1P83916 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.8■□□□□ 0.92
CBX1P83916 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.8■□□□□ 0.92
CBX1P83916 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX1P83916 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms