Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IRX4P78413 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.61■□□□□ 0.89
IRX4P78413 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.61■□□□□ 0.89
IRX4P78413 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX4P78413 SNORA78-201ENST00000459373 127 ntBASIC20.61■□□□□ 0.89
IRX4P78413 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.61■□□□□ 0.89
IRX4P78413 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
IRX4P78413 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX4P78413 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
IRX4P78413 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX4P78413 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
IRX4P78413 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
IRX4P78413 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX4P78413 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX4P78413 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 PNMA6B-201ENST00000538162 1200 ntBASIC20.6■□□□□ 0.89
IRX4P78413 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.6■□□□□ 0.89
IRX4P78413 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.6■□□□□ 0.89
IRX4P78413 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.6■□□□□ 0.89
IRX4P78413 FAM21FP-204ENST00000608637 956 ntBASIC20.6■□□□□ 0.89
IRX4P78413 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.6■□□□□ 0.89
IRX4P78413 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX4P78413 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX4P78413 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
IRX4P78413 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 FP700111.2-201ENST00000619190 1892 ntBASIC20.6■□□□□ 0.89
IRX4P78413 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
IRX4P78413 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX4P78413 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
IRX4P78413 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
IRX4P78413 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
IRX4P78413 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
IRX4P78413 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
IRX4P78413 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
IRX4P78413 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.59■□□□□ 0.89
IRX4P78413 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 AC100791.3-201ENST00000617619 330 ntBASIC20.59■□□□□ 0.89
IRX4P78413 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.59■□□□□ 0.89
IRX4P78413 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
IRX4P78413 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
IRX4P78413 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX4P78413 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.58■□□□□ 0.89
IRX4P78413 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.58■□□□□ 0.89
IRX4P78413 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IRX4P78413 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX4P78413 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.58■□□□□ 0.89
IRX4P78413 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IRX4P78413 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
IRX4P78413 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.58■□□□□ 0.89
IRX4P78413 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
IRX4P78413 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
IRX4P78413 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX4P78413 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
IRX4P78413 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
IRX4P78413 AC091799.1-201ENST00000422823 811 ntBASIC20.58■□□□□ 0.89
IRX4P78413 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
IRX4P78413 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
IRX4P78413 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 AC092368.3-202ENST00000574180 1591 ntBASIC20.58■□□□□ 0.88
IRX4P78413 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.58■□□□□ 0.88
IRX4P78413 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
IRX4P78413 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.57■□□□□ 0.88
IRX4P78413 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
IRX4P78413 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.57■□□□□ 0.88
IRX4P78413 AC020907.5-201ENST00000624372 1936 ntBASIC20.57■□□□□ 0.88
IRX4P78413 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms