Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPS4XP62701 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RPS4XP62701 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4XP62701 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.96■□□□□ 0.47
RPS4XP62701 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4XP62701 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4XP62701 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 AL355472.2-201ENST00000422958 438 ntBASIC17.96■□□□□ 0.47
RPS4XP62701 AC093787.1-201ENST00000450396 207 ntBASIC17.96■□□□□ 0.47
RPS4XP62701 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.96■□□□□ 0.47
RPS4XP62701 AL589743.5-201ENST00000616611 1050 ntBASIC17.96■□□□□ 0.47
RPS4XP62701 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RPS4XP62701 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RPS4XP62701 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4XP62701 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4XP62701 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4XP62701 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RPS4XP62701 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.96■□□□□ 0.46
RPS4XP62701 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RPS4XP62701 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RPS4XP62701 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.95■□□□□ 0.46
RPS4XP62701 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.95■□□□□ 0.46
RPS4XP62701 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.95■□□□□ 0.46
RPS4XP62701 TREX1-205ENST00000625293 1783 ntBASIC17.95■□□□□ 0.46
RPS4XP62701 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RPS4XP62701 POU5F1P3-201ENST00000428824 1078 ntBASIC17.95■□□□□ 0.46
RPS4XP62701 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.95■□□□□ 0.46
RPS4XP62701 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RPS4XP62701 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 KRT16P6-202ENST00000425692 1426 ntBASIC17.95■□□□□ 0.46
RPS4XP62701 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4XP62701 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPS4XP62701 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPS4XP62701 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 BX276092.2-201ENST00000417668 665 ntBASIC17.94■□□□□ 0.46
RPS4XP62701 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.94■□□□□ 0.46
RPS4XP62701 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.94■□□□□ 0.46
RPS4XP62701 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.94■□□□□ 0.46
RPS4XP62701 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
RPS4XP62701 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS4XP62701 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS4XP62701 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RPS4XP62701 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.94■□□□□ 0.46
RPS4XP62701 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4XP62701 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4XP62701 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4XP62701 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RPS4XP62701 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RPS4XP62701 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.93■□□□□ 0.46
RPS4XP62701 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RPS4XP62701 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.93■□□□□ 0.46
RPS4XP62701 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.93■□□□□ 0.46
RPS4XP62701 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4XP62701 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.93■□□□□ 0.46
RPS4XP62701 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4XP62701 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4XP62701 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RPS4XP62701 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RPS4XP62701 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4XP62701 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms