Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 AP005212.1-201ENST00000581547 1997 ntBASIC13.87□□□□□ -0.19
CKS1BP61024 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.87□□□□□ -0.19
CKS1BP61024 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.87□□□□□ -0.19
CKS1BP61024 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.87□□□□□ -0.19
CKS1BP61024 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.87□□□□□ -0.19
CKS1BP61024 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.87□□□□□ -0.19
CKS1BP61024 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.87□□□□□ -0.19
CKS1BP61024 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CKS1BP61024 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CKS1BP61024 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CKS1BP61024 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CKS1BP61024 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CKS1BP61024 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CKS1BP61024 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CKS1BP61024 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS1BP61024 AC099398.1-201ENST00000567919 2776 ntBASIC13.86□□□□□ -0.19
CKS1BP61024 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.86□□□□□ -0.19
CKS1BP61024 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS1BP61024 AP000974.1-201ENST00000623909 2387 ntBASIC13.86□□□□□ -0.19
CKS1BP61024 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CKS1BP61024 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS1BP61024 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CKS1BP61024 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 AC009237.3-201ENST00000393279 1427 ntBASIC13.86□□□□□ -0.19
CKS1BP61024 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CKS1BP61024 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CKS1BP61024 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.86□□□□□ -0.19
CKS1BP61024 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 AC073314.1-201ENST00000568729 2216 ntBASIC13.86□□□□□ -0.19
CKS1BP61024 PCDHB18P-201ENST00000524813 2368 ntBASIC13.86□□□□□ -0.19
CKS1BP61024 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CKS1BP61024 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CKS1BP61024 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CKS1BP61024 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CKS1BP61024 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms