Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.13■□□□□ 0.17
SPCS3P61009 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.13■□□□□ 0.17
SPCS3P61009 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.13■□□□□ 0.17
SPCS3P61009 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.13■□□□□ 0.17
SPCS3P61009 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.13■□□□□ 0.17
SPCS3P61009 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.13■□□□□ 0.17
SPCS3P61009 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 AC106820.2-201ENST00000563775 3264 ntBASIC16.13■□□□□ 0.17
SPCS3P61009 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPCS3P61009 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPCS3P61009 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS3P61009 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.13■□□□□ 0.17
SPCS3P61009 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
SPCS3P61009 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.12■□□□□ 0.17
SPCS3P61009 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.12■□□□□ 0.17
SPCS3P61009 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SPCS3P61009 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.12■□□□□ 0.17
SPCS3P61009 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SPCS3P61009 AC097381.1-201ENST00000429019 1296 ntBASIC16.12■□□□□ 0.17
SPCS3P61009 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.12■□□□□ 0.17
SPCS3P61009 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.12■□□□□ 0.17
SPCS3P61009 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
SPCS3P61009 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.12■□□□□ 0.17
SPCS3P61009 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS3P61009 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
SPCS3P61009 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.11■□□□□ 0.17
SPCS3P61009 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.11■□□□□ 0.17
SPCS3P61009 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPCS3P61009 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SPCS3P61009 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.11■□□□□ 0.17
SPCS3P61009 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.11■□□□□ 0.17
SPCS3P61009 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.11■□□□□ 0.17
SPCS3P61009 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 AC123595.1-201ENST00000440769 1046 ntBASIC16.11■□□□□ 0.17
SPCS3P61009 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.11■□□□□ 0.17
SPCS3P61009 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.11■□□□□ 0.17
SPCS3P61009 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPCS3P61009 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SPCS3P61009 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS3P61009 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.1■□□□□ 0.17
SPCS3P61009 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SPCS3P61009 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SPCS3P61009 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS3P61009 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.1■□□□□ 0.17
SPCS3P61009 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms