Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.06□□□□□ -0.64
SEC61GP60059 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC11.06□□□□□ -0.64
SEC61GP60059 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SEC61GP60059 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.06□□□□□ -0.64
SEC61GP60059 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SEC61GP60059 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.06□□□□□ -0.64
SEC61GP60059 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SEC61GP60059 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.05□□□□□ -0.64
SEC61GP60059 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SEC61GP60059 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC11.05□□□□□ -0.64
SEC61GP60059 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.05□□□□□ -0.64
SEC61GP60059 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.05□□□□□ -0.64
SEC61GP60059 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SEC61GP60059 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 AC108673.1-201ENST00000510422 1159 ntBASIC11.05□□□□□ -0.64
SEC61GP60059 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.05□□□□□ -0.64
SEC61GP60059 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.05□□□□□ -0.64
SEC61GP60059 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SEC61GP60059 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SEC61GP60059 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SEC61GP60059 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SEC61GP60059 FLJ38576-201ENST00000623820 2459 ntBASIC11.04□□□□□ -0.64
SEC61GP60059 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SEC61GP60059 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
SEC61GP60059 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.04□□□□□ -0.64
SEC61GP60059 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SEC61GP60059 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SEC61GP60059 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC11.04□□□□□ -0.64
SEC61GP60059 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SEC61GP60059 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.04□□□□□ -0.64
SEC61GP60059 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC11.04□□□□□ -0.64
SEC61GP60059 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SEC61GP60059 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SEC61GP60059 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.04□□□□□ -0.64
SEC61GP60059 NORAD-201ENST00000565493 5339 ntBASIC11.04□□□□□ -0.64
SEC61GP60059 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SEC61GP60059 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.03□□□□□ -0.64
SEC61GP60059 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms