Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP3S2P59780 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.07■□□□□ 0.32
AP3S2P59780 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3S2P59780 AC053503.5-201ENST00000601508 636 ntBASIC17.07■□□□□ 0.32
AP3S2P59780 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.07■□□□□ 0.32
AP3S2P59780 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 AC136469.2-201ENST00000623944 1028 ntBASIC17.07■□□□□ 0.32
AP3S2P59780 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AP3S2P59780 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP3S2P59780 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
AP3S2P59780 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP3S2P59780 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3S2P59780 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AP3S2P59780 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
AP3S2P59780 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 AC061975.6-201ENST00000579045 1553 ntBASIC17.06■□□□□ 0.32
AP3S2P59780 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S2P59780 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S2P59780 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 AC005224.4-201ENST00000583262 1652 ntBASIC17.05■□□□□ 0.32
AP3S2P59780 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.05■□□□□ 0.32
AP3S2P59780 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 AL356740.2-201ENST00000601559 647 ntBASIC17.05■□□□□ 0.32
AP3S2P59780 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AP3S2P59780 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S2P59780 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S2P59780 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
AP3S2P59780 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3S2P59780 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 AC245052.3-201ENST00000450182 901 ntBASIC17.04■□□□□ 0.32
AP3S2P59780 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S2P59780 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3S2P59780 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms