Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 KRT16P6-202ENST00000425692 1426 ntBASIC17.47■□□□□ 0.39
FOXG1P55316 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FOXG1P55316 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 AL158047.1-201ENST00000445918 881 ntBASIC17.47■□□□□ 0.39
FOXG1P55316 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXG1P55316 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXG1P55316 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXG1P55316 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXG1P55316 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
FOXG1P55316 AC142381.4-202ENST00000563973 229 ntBASIC17.47■□□□□ 0.39
FOXG1P55316 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXG1P55316 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXG1P55316 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.47■□□□□ 0.39
FOXG1P55316 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.46■□□□□ 0.39
FOXG1P55316 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
FOXG1P55316 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXG1P55316 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
FOXG1P55316 RPPH1-201ENST00000516869 333 ntBASIC17.46■□□□□ 0.39
FOXG1P55316 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.46■□□□□ 0.39
FOXG1P55316 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.46■□□□□ 0.39
FOXG1P55316 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.46■□□□□ 0.39
FOXG1P55316 AL359736.2-201ENST00000621992 437 ntBASIC17.46■□□□□ 0.39
FOXG1P55316 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FOXG1P55316 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.46■□□□□ 0.39
FOXG1P55316 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.46■□□□□ 0.39
FOXG1P55316 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FOXG1P55316 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
FOXG1P55316 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
FOXG1P55316 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.45■□□□□ 0.38
FOXG1P55316 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.45■□□□□ 0.38
FOXG1P55316 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
FOXG1P55316 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.45■□□□□ 0.38
FOXG1P55316 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
FOXG1P55316 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
FOXG1P55316 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.45■□□□□ 0.38
FOXG1P55316 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXG1P55316 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXG1P55316 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXG1P55316 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXG1P55316 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXG1P55316 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXG1P55316 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXG1P55316 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXG1P55316 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXG1P55316 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms