Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
EPHA4P54764 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHA4P54764 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.19■□□□□ 0.66
EPHA4P54764 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHA4P54764 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
EPHA4P54764 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
EPHA4P54764 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHA4P54764 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHA4P54764 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHA4P54764 TSPY7P-201ENST00000431358 1114 ntBASIC19.18■□□□□ 0.66
EPHA4P54764 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHA4P54764 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.18■□□□□ 0.66
EPHA4P54764 AF186192.3-201ENST00000583427 947 ntBASIC19.18■□□□□ 0.66
EPHA4P54764 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
EPHA4P54764 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.18■□□□□ 0.66
EPHA4P54764 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHA4P54764 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.18■□□□□ 0.66
EPHA4P54764 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHA4P54764 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA4P54764 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.17■□□□□ 0.66
EPHA4P54764 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHA4P54764 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHA4P54764 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.17■□□□□ 0.66
EPHA4P54764 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHA4P54764 AC073912.3-201ENST00000624414 853 ntBASIC19.17■□□□□ 0.66
EPHA4P54764 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
EPHA4P54764 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.17■□□□□ 0.66
EPHA4P54764 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA4P54764 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHA4P54764 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EPHA4P54764 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
EPHA4P54764 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHA4P54764 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.16■□□□□ 0.66
EPHA4P54764 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHA4P54764 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.16■□□□□ 0.66
EPHA4P54764 AL353708.3-201ENST00000610272 989 ntBASIC19.16■□□□□ 0.66
EPHA4P54764 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHA4P54764 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.16■□□□□ 0.66
EPHA4P54764 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EPHA4P54764 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EPHA4P54764 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA4P54764 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA4P54764 AC116351.2-201ENST00000606540 1585 ntBASIC19.15■□□□□ 0.66
EPHA4P54764 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
EPHA4P54764 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
EPHA4P54764 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA4P54764 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
EPHA4P54764 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA4P54764 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
EPHA4P54764 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EPHA4P54764 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHA4P54764 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHA4P54764 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
EPHA4P54764 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.15■□□□□ 0.66
EPHA4P54764 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.15■□□□□ 0.66
EPHA4P54764 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA4P54764 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EPHA4P54764 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EPHA4P54764 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA4P54764 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA4P54764 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
EPHA4P54764 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.14■□□□□ 0.65
EPHA4P54764 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.14■□□□□ 0.65
EPHA4P54764 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.14■□□□□ 0.65
EPHA4P54764 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.14■□□□□ 0.65
EPHA4P54764 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA4P54764 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
EPHA4P54764 AC073195.1-201ENST00000607241 877 ntBASIC19.14■□□□□ 0.65
EPHA4P54764 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EPHA4P54764 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms