Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.33■■□□□ 1.49
PDE1AP54750 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.33■■□□□ 1.49
PDE1AP54750 AC133041.1-202ENST00000642053 222 ntBASIC24.33■■□□□ 1.49
PDE1AP54750 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.33■■□□□ 1.49
PDE1AP54750 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.33■■□□□ 1.49
PDE1AP54750 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
PDE1AP54750 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.33■■□□□ 1.48
PDE1AP54750 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PDE1AP54750 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PDE1AP54750 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE1AP54750 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE1AP54750 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE1AP54750 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDE1AP54750 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.32■■□□□ 1.48
PDE1AP54750 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE1AP54750 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.31■■□□□ 1.48
PDE1AP54750 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE1AP54750 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE1AP54750 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE1AP54750 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PDE1AP54750 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.31■■□□□ 1.48
PDE1AP54750 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.31■■□□□ 1.48
PDE1AP54750 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE1AP54750 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 HLA-B-256ENST00000639848 1089 ntBASIC24.31■■□□□ 1.48
PDE1AP54750 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE1AP54750 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PDE1AP54750 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 AP001271.2-201ENST00000624018 1556 ntBASIC24.3■■□□□ 1.48
PDE1AP54750 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PDE1AP54750 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PDE1AP54750 TREX1-205ENST00000625293 1783 ntBASIC24.3■■□□□ 1.48
PDE1AP54750 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.3■■□□□ 1.48
PDE1AP54750 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE1AP54750 AC006557.6-201ENST00000623071 864 ntBASIC24.3■■□□□ 1.48
PDE1AP54750 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
PDE1AP54750 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE1AP54750 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.29■■□□□ 1.48
PDE1AP54750 ID1-201ENST00000376105 1233 ntBASIC24.29■■□□□ 1.48
PDE1AP54750 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.29■■□□□ 1.48
PDE1AP54750 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.29■■□□□ 1.48
PDE1AP54750 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.29■■□□□ 1.48
PDE1AP54750 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.29■■□□□ 1.48
PDE1AP54750 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PDE1AP54750 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PDE1AP54750 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE1AP54750 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PDE1AP54750 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.28■■□□□ 1.48
PDE1AP54750 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.28■■□□□ 1.48
PDE1AP54750 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PDE1AP54750 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDE1AP54750 AL355802.2-201ENST00000402069 882 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms