Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EFNB2P52799 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EFNB2P52799 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EFNB2P52799 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.18■□□□□ 0.34
EFNB2P52799 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.17■□□□□ 0.34
EFNB2P52799 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.17■□□□□ 0.34
EFNB2P52799 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.17■□□□□ 0.34
EFNB2P52799 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.17■□□□□ 0.34
EFNB2P52799 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.17■□□□□ 0.34
EFNB2P52799 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
EFNB2P52799 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFNB2P52799 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB2P52799 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.16■□□□□ 0.34
EFNB2P52799 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.16■□□□□ 0.34
EFNB2P52799 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.16■□□□□ 0.34
EFNB2P52799 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.16■□□□□ 0.34
EFNB2P52799 KRT18P61-201ENST00000585825 1298 ntBASIC17.16■□□□□ 0.34
EFNB2P52799 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.16■□□□□ 0.34
EFNB2P52799 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB2P52799 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
EFNB2P52799 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB2P52799 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.16■□□□□ 0.34
EFNB2P52799 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFNB2P52799 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
EFNB2P52799 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB2P52799 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 AC007322.3-201ENST00000426526 701 ntBASIC17.15■□□□□ 0.34
EFNB2P52799 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.15■□□□□ 0.34
EFNB2P52799 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB2P52799 AC104187.1-201ENST00000607510 612 ntBASIC17.15■□□□□ 0.34
EFNB2P52799 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
EFNB2P52799 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.15■□□□□ 0.34
EFNB2P52799 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 NEFHP1-201ENST00000412845 2629 ntBASIC17.15■□□□□ 0.34
EFNB2P52799 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFNB2P52799 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
EFNB2P52799 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
EFNB2P52799 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNB2P52799 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.14■□□□□ 0.33
EFNB2P52799 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNB2P52799 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.14■□□□□ 0.33
EFNB2P52799 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFNB2P52799 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.13■□□□□ 0.33
EFNB2P52799 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EFNB2P52799 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.13■□□□□ 0.33
EFNB2P52799 AC006015.1-201ENST00000429970 570 ntBASIC17.13■□□□□ 0.33
EFNB2P52799 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
EFNB2P52799 AP001160.3-201ENST00000601484 763 ntBASIC17.13■□□□□ 0.33
EFNB2P52799 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFNB2P52799 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFNB2P52799 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms