Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SSR1P43307 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.08■□□□□ 0.97
SSR1P43307 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SSR1P43307 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.08■□□□□ 0.97
SSR1P43307 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.08■□□□□ 0.97
SSR1P43307 AC231657.2-201ENST00000624556 255 ntBASIC21.08■□□□□ 0.97
SSR1P43307 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
SSR1P43307 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
SSR1P43307 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.08■□□□□ 0.96
SSR1P43307 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SSR1P43307 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.08■□□□□ 0.96
SSR1P43307 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.08■□□□□ 0.96
SSR1P43307 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.08■□□□□ 0.96
SSR1P43307 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SSR1P43307 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.08■□□□□ 0.96
SSR1P43307 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SSR1P43307 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SSR1P43307 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 MIR935-201ENST00000401179 91 ntBASIC21.07■□□□□ 0.96
SSR1P43307 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.07■□□□□ 0.96
SSR1P43307 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.07■□□□□ 0.96
SSR1P43307 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.07■□□□□ 0.96
SSR1P43307 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.07■□□□□ 0.96
SSR1P43307 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR1P43307 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SSR1P43307 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR1P43307 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SSR1P43307 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR1P43307 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR1P43307 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.06■□□□□ 0.96
SSR1P43307 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.06■□□□□ 0.96
SSR1P43307 AL355472.2-201ENST00000422958 438 ntBASIC21.06■□□□□ 0.96
SSR1P43307 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SSR1P43307 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR1P43307 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR1P43307 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SSR1P43307 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.06■□□□□ 0.96
SSR1P43307 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR1P43307 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR1P43307 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR1P43307 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SSR1P43307 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR1P43307 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SSR1P43307 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SSR1P43307 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.05■□□□□ 0.96
SSR1P43307 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.05■□□□□ 0.96
SSR1P43307 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
SSR1P43307 KRT18P68-201ENST00000392293 1000 ntBASIC21.05■□□□□ 0.96
SSR1P43307 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.05■□□□□ 0.96
SSR1P43307 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.05■□□□□ 0.96
SSR1P43307 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.05■□□□□ 0.96
SSR1P43307 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR1P43307 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.05■□□□□ 0.96
SSR1P43307 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SSR1P43307 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SSR1P43307 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 AL691432.2-201ENST00000607222 2038 ntBASIC21.04■□□□□ 0.96
SSR1P43307 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.04■□□□□ 0.96
SSR1P43307 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SSR1P43307 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 AC004911.1-201ENST00000416316 871 ntBASIC21.04■□□□□ 0.96
SSR1P43307 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.04■□□□□ 0.96
SSR1P43307 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 AC100791.3-201ENST00000617619 330 ntBASIC21.04■□□□□ 0.96
SSR1P43307 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.04■□□□□ 0.96
SSR1P43307 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms