Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 AC022517.1-201ENST00000592429 346 ntBASIC20.82■□□□□ 0.92
SLC1A1P43005 AC005181.1-201ENST00000604782 1256 ntBASIC20.82■□□□□ 0.92
SLC1A1P43005 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SLC1A1P43005 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SLC1A1P43005 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC1A1P43005 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC1A1P43005 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC1A1P43005 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC1A1P43005 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC1A1P43005 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC1A1P43005 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC1A1P43005 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC1A1P43005 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.81■□□□□ 0.92
SLC1A1P43005 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC1A1P43005 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A1P43005 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC1A1P43005 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A1P43005 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A1P43005 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 KRT17P1-201ENST00000399211 1546 ntBASIC20.8■□□□□ 0.92
SLC1A1P43005 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC1A1P43005 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC1A1P43005 PHGDH-210ENST00000641115 1638 ntBASIC20.8■□□□□ 0.92
SLC1A1P43005 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 AC093787.1-201ENST00000450396 207 ntBASIC20.8■□□□□ 0.92
SLC1A1P43005 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC1A1P43005 AC133552.2-202ENST00000575694 574 ntBASIC20.8■□□□□ 0.92
SLC1A1P43005 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A1P43005 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A1P43005 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A1P43005 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A1P43005 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SLC1A1P43005 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC1A1P43005 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A1P43005 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.79■□□□□ 0.92
SLC1A1P43005 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC1A1P43005 AC005332.7-201ENST00000614046 2005 ntBASIC20.79■□□□□ 0.92
SLC1A1P43005 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC1A1P43005 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC1A1P43005 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SLC1A1P43005 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC1A1P43005 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.79■□□□□ 0.92
SLC1A1P43005 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A1P43005 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC1A1P43005 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC1A1P43005 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLC1A1P43005 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A1P43005 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A1P43005 AC093484.2-201ENST00000580996 2166 ntBASIC20.78■□□□□ 0.92
SLC1A1P43005 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A1P43005 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A1P43005 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms