Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDKN2CP42773 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDKN2CP42773 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.79■□□□□ 0.6
CDKN2CP42773 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.79■□□□□ 0.6
CDKN2CP42773 AL031963.3-201ENST00000606441 850 ntBASIC18.79■□□□□ 0.6
CDKN2CP42773 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKN2CP42773 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.79■□□□□ 0.6
CDKN2CP42773 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKN2CP42773 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKN2CP42773 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDKN2CP42773 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.78■□□□□ 0.6
CDKN2CP42773 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CDKN2CP42773 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 KRT18P68-201ENST00000392293 1000 ntBASIC18.78■□□□□ 0.6
CDKN2CP42773 AC016769.1-201ENST00000409132 1010 ntBASIC18.78■□□□□ 0.6
CDKN2CP42773 AL355472.2-201ENST00000422958 438 ntBASIC18.78■□□□□ 0.6
CDKN2CP42773 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.78■□□□□ 0.6
CDKN2CP42773 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.78■□□□□ 0.6
CDKN2CP42773 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKN2CP42773 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CDKN2CP42773 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDKN2CP42773 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKN2CP42773 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.77■□□□□ 0.6
CDKN2CP42773 CYP2T1P-201ENST00000432607 1285 ntBASIC18.77■□□□□ 0.6
CDKN2CP42773 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKN2CP42773 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKN2CP42773 BX323043.1-201ENST00000641006 1765 ntBASIC18.77■□□□□ 0.6
CDKN2CP42773 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CDKN2CP42773 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKN2CP42773 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKN2CP42773 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CDKN2CP42773 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKN2CP42773 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKN2CP42773 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDKN2CP42773 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 KRT8P20-201ENST00000423953 1409 ntBASIC18.76■□□□□ 0.59
CDKN2CP42773 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKN2CP42773 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKN2CP42773 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CDKN2CP42773 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKN2CP42773 AC006015.1-201ENST00000429970 570 ntBASIC18.76■□□□□ 0.59
CDKN2CP42773 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKN2CP42773 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.76■□□□□ 0.59
CDKN2CP42773 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKN2CP42773 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKN2CP42773 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKN2CP42773 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CDKN2CP42773 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDKN2CP42773 CYP2T3P-201ENST00000601990 817 ntBASIC18.76■□□□□ 0.59
CDKN2CP42773 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKN2CP42773 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKN2CP42773 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CDKN2CP42773 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKN2CP42773 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms