Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC5P40937 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC5P40937 PHGDH-210ENST00000641115 1638 ntBASIC21.98■■□□□ 1.11
RFC5P40937 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC5P40937 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC5P40937 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
RFC5P40937 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RFC5P40937 MIR718-201ENST00000390190 70 ntBASIC21.97■■□□□ 1.11
RFC5P40937 RPS2P4-201ENST00000476944 856 ntBASIC21.97■■□□□ 1.11
RFC5P40937 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.97■■□□□ 1.11
RFC5P40937 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
RFC5P40937 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RFC5P40937 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFC5P40937 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.97■■□□□ 1.11
RFC5P40937 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RFC5P40937 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC5P40937 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC5P40937 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
RFC5P40937 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC5P40937 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
RFC5P40937 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC5P40937 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.96■■□□□ 1.11
RFC5P40937 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFC5P40937 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFC5P40937 AC018553.1-201ENST00000616682 1458 ntBASIC21.96■■□□□ 1.11
RFC5P40937 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.96■■□□□ 1.11
RFC5P40937 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.95■■□□□ 1.11
RFC5P40937 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
RFC5P40937 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 AL162377.1-201ENST00000618844 1793 ntBASIC21.95■■□□□ 1.1
RFC5P40937 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.95■■□□□ 1.1
RFC5P40937 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RFC5P40937 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.95■■□□□ 1.1
RFC5P40937 KRT16P5-201ENST00000455284 522 ntBASIC21.95■■□□□ 1.1
RFC5P40937 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.95■■□□□ 1.1
RFC5P40937 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC5P40937 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC5P40937 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.95■■□□□ 1.1
RFC5P40937 AC004264.1-201ENST00000608354 794 ntBASIC21.95■■□□□ 1.1
RFC5P40937 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC5P40937 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC5P40937 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
RFC5P40937 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 TFP1-202ENST00000475455 1573 ntBASIC21.95■■□□□ 1.1
RFC5P40937 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC5P40937 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC5P40937 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFC5P40937 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC5P40937 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 AL512408.1-201ENST00000569378 2000 ntBASIC21.94■■□□□ 1.1
RFC5P40937 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RFC5P40937 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.94■■□□□ 1.1
RFC5P40937 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.94■■□□□ 1.1
RFC5P40937 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.94■■□□□ 1.1
RFC5P40937 RARRES2P10-201ENST00000564312 460 ntBASIC21.94■■□□□ 1.1
RFC5P40937 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.94■■□□□ 1.1
RFC5P40937 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RFC5P40937 AL135905.2-201ENST00000584934 1404 ntBASIC21.94■■□□□ 1.1
RFC5P40937 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFC5P40937 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC5P40937 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFC5P40937 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC5P40937 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms