Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GDNFP39905 AC061975.6-201ENST00000579045 1553 ntBASIC17.28■□□□□ 0.36
GDNFP39905 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.27■□□□□ 0.36
GDNFP39905 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.27■□□□□ 0.36
GDNFP39905 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GDNFP39905 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GDNFP39905 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.27■□□□□ 0.36
GDNFP39905 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.27■□□□□ 0.36
GDNFP39905 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDNFP39905 AC004854.2-201ENST00000608450 1441 ntBASIC17.27■□□□□ 0.35
GDNFP39905 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDNFP39905 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GDNFP39905 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.27■□□□□ 0.35
GDNFP39905 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDNFP39905 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.27■□□□□ 0.35
GDNFP39905 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDNFP39905 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDNFP39905 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GDNFP39905 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GDNFP39905 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.26■□□□□ 0.35
GDNFP39905 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GDNFP39905 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.26■□□□□ 0.35
GDNFP39905 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.26■□□□□ 0.35
GDNFP39905 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GDNFP39905 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 AC097381.1-201ENST00000429019 1296 ntBASIC17.26■□□□□ 0.35
GDNFP39905 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.26■□□□□ 0.35
GDNFP39905 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.26■□□□□ 0.35
GDNFP39905 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.26■□□□□ 0.35
GDNFP39905 AC104187.1-201ENST00000607510 612 ntBASIC17.26■□□□□ 0.35
GDNFP39905 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.26■□□□□ 0.35
GDNFP39905 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GDNFP39905 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GDNFP39905 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.26■□□□□ 0.35
GDNFP39905 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDNFP39905 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.26■□□□□ 0.35
GDNFP39905 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 AP004607.4-201ENST00000530158 1459 ntBASIC17.25■□□□□ 0.35
GDNFP39905 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.25■□□□□ 0.35
GDNFP39905 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GDNFP39905 AC026271.2-201ENST00000428091 497 ntBASIC17.25■□□□□ 0.35
GDNFP39905 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 MIR6821-201ENST00000617625 74 ntBASIC17.25■□□□□ 0.35
GDNFP39905 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.25■□□□□ 0.35
GDNFP39905 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDNFP39905 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
GDNFP39905 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.25■□□□□ 0.35
GDNFP39905 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms