Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
COL15A1P39059 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.34■■□□□ 1.65
COL15A1P39059 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.34■■□□□ 1.65
COL15A1P39059 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.34■■□□□ 1.65
COL15A1P39059 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.34■■□□□ 1.65
COL15A1P39059 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
COL15A1P39059 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 AC073508.3-201ENST00000619697 1419 ntBASIC25.34■■□□□ 1.65
COL15A1P39059 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL15A1P39059 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL15A1P39059 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL15A1P39059 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.33■■□□□ 1.65
COL15A1P39059 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.33■■□□□ 1.65
COL15A1P39059 C1QL1P1-201ENST00000568105 661 ntBASIC25.33■■□□□ 1.65
COL15A1P39059 KRT18P22-201ENST00000402024 1347 ntBASIC25.33■■□□□ 1.65
COL15A1P39059 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.33■■□□□ 1.65
COL15A1P39059 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL15A1P39059 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL15A1P39059 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL15A1P39059 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL15A1P39059 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
COL15A1P39059 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
COL15A1P39059 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.32■■□□□ 1.64
COL15A1P39059 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL15A1P39059 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL15A1P39059 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL15A1P39059 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.32■■□□□ 1.64
COL15A1P39059 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.32■■□□□ 1.64
COL15A1P39059 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.32■■□□□ 1.64
COL15A1P39059 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
COL15A1P39059 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.32■■□□□ 1.64
COL15A1P39059 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.32■■□□□ 1.64
COL15A1P39059 CLDN5-201ENST00000403084 2357 ntBASIC25.32■■□□□ 1.64
COL15A1P39059 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL15A1P39059 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
COL15A1P39059 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
COL15A1P39059 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.32■■□□□ 1.64
COL15A1P39059 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL15A1P39059 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL15A1P39059 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL15A1P39059 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL15A1P39059 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.31■■□□□ 1.64
COL15A1P39059 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.31■■□□□ 1.64
COL15A1P39059 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.31■■□□□ 1.64
COL15A1P39059 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.31■■□□□ 1.64
COL15A1P39059 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.31■■□□□ 1.64
COL15A1P39059 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
COL15A1P39059 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.31■■□□□ 1.64
COL15A1P39059 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.31■■□□□ 1.64
COL15A1P39059 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL15A1P39059 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL15A1P39059 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
COL15A1P39059 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.31■■□□□ 1.64
COL15A1P39059 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.31■■□□□ 1.64
COL15A1P39059 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.31■■□□□ 1.64
COL15A1P39059 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.31■■□□□ 1.64
COL15A1P39059 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.31■■□□□ 1.64
COL15A1P39059 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL15A1P39059 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL15A1P39059 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.3■■□□□ 1.64
COL15A1P39059 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 AL121603.2-201ENST00000557373 2117 ntBASIC25.3■■□□□ 1.64
COL15A1P39059 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
COL15A1P39059 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
COL15A1P39059 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL15A1P39059 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.3■■□□□ 1.64
COL15A1P39059 MESTP1-201ENST00000404287 994 ntBASIC25.3■■□□□ 1.64
COL15A1P39059 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
COL15A1P39059 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL15A1P39059 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.29■■□□□ 1.64
COL15A1P39059 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
COL15A1P39059 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL15A1P39059 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL15A1P39059 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL15A1P39059 AL137013.1-201ENST00000432946 1228 ntBASIC25.29■■□□□ 1.64
COL15A1P39059 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.29■■□□□ 1.64
COL15A1P39059 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL15A1P39059 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL15A1P39059 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.28■■□□□ 1.64
COL15A1P39059 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL15A1P39059 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.28■■□□□ 1.64
COL15A1P39059 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL15A1P39059 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.28■■□□□ 1.64
COL15A1P39059 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.28■■□□□ 1.64
COL15A1P39059 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.28■■□□□ 1.64
COL15A1P39059 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
COL15A1P39059 AC026271.3-201ENST00000571884 352 ntBASIC25.28■■□□□ 1.64
COL15A1P39059 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms