Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA3P29320 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
EPHA3P29320 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA3P29320 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA3P29320 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.34■□□□□ 0.69
EPHA3P29320 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA3P29320 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
EPHA3P29320 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EPHA3P29320 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.33■□□□□ 0.69
EPHA3P29320 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
EPHA3P29320 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
EPHA3P29320 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
EPHA3P29320 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EPHA3P29320 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.33■□□□□ 0.69
EPHA3P29320 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EPHA3P29320 AC093503.3-201ENST00000624917 2352 ntBASIC19.33■□□□□ 0.69
EPHA3P29320 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.33■□□□□ 0.69
EPHA3P29320 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
EPHA3P29320 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 AC097381.1-201ENST00000429019 1296 ntBASIC19.33■□□□□ 0.68
EPHA3P29320 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.33■□□□□ 0.68
EPHA3P29320 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
EPHA3P29320 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
EPHA3P29320 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.33■□□□□ 0.68
EPHA3P29320 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
EPHA3P29320 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 AC087633.2-202ENST00000565166 1439 ntBASIC19.33■□□□□ 0.68
EPHA3P29320 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EPHA3P29320 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
EPHA3P29320 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHA3P29320 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
EPHA3P29320 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 AC009237.14-201ENST00000609975 1594 ntBASIC19.32■□□□□ 0.68
EPHA3P29320 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
EPHA3P29320 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHA3P29320 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
EPHA3P29320 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.32■□□□□ 0.68
EPHA3P29320 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.32■□□□□ 0.68
EPHA3P29320 PGM5P4-201ENST00000421970 445 ntBASIC19.32■□□□□ 0.68
EPHA3P29320 AC123595.1-201ENST00000440769 1046 ntBASIC19.32■□□□□ 0.68
EPHA3P29320 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
EPHA3P29320 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
EPHA3P29320 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHA3P29320 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
EPHA3P29320 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
EPHA3P29320 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHA3P29320 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHA3P29320 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHA3P29320 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHA3P29320 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.31■□□□□ 0.68
EPHA3P29320 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EPHA3P29320 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHA3P29320 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.3■□□□□ 0.68
EPHA3P29320 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHA3P29320 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
EPHA3P29320 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
EPHA3P29320 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EPHA3P29320 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHA3P29320 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
EPHA3P29320 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EPHA3P29320 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
EPHA3P29320 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHA3P29320 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHA3P29320 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHA3P29320 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.29■□□□□ 0.68
EPHA3P29320 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EPHA3P29320 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EPHA3P29320 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.29■□□□□ 0.68
EPHA3P29320 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
EPHA3P29320 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.29■□□□□ 0.68
EPHA3P29320 PTBP1P-201ENST00000554374 1601 ntBASIC19.29■□□□□ 0.68
EPHA3P29320 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms