Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPARCP09486 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SPARCP09486 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.69■□□□□ 0.42
SPARCP09486 CNN2P6-201ENST00000439038 900 ntBASIC17.69■□□□□ 0.42
SPARCP09486 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.69■□□□□ 0.42
SPARCP09486 DUX4L16-201ENST00000555130 1264 ntBASIC17.69■□□□□ 0.42
SPARCP09486 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.69■□□□□ 0.42
SPARCP09486 AC011767.1-201ENST00000617410 1153 ntBASIC17.69■□□□□ 0.42
SPARCP09486 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.69■□□□□ 0.42
SPARCP09486 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SPARCP09486 AC068338.2-201ENST00000563278 1430 ntBASIC17.69■□□□□ 0.42
SPARCP09486 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.69■□□□□ 0.42
SPARCP09486 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SPARCP09486 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPARCP09486 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.69■□□□□ 0.42
SPARCP09486 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPARCP09486 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SPARCP09486 HCG11-201ENST00000411553 5696 ntBASIC17.68■□□□□ 0.42
SPARCP09486 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.68■□□□□ 0.42
SPARCP09486 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
SPARCP09486 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SPARCP09486 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.68■□□□□ 0.42
SPARCP09486 RARRES2P6-201ENST00000567333 442 ntBASIC17.68■□□□□ 0.42
SPARCP09486 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SPARCP09486 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.68■□□□□ 0.42
SPARCP09486 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.68■□□□□ 0.42
SPARCP09486 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SPARCP09486 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPARCP09486 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPARCP09486 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPARCP09486 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPARCP09486 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.67■□□□□ 0.42
SPARCP09486 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.67■□□□□ 0.42
SPARCP09486 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 AC069236.1-201ENST00000604339 616 ntBASIC17.67■□□□□ 0.42
SPARCP09486 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 BID-214ENST00000617586 542 ntTSL 5 BASIC17.67■□□□□ 0.42
SPARCP09486 AC100791.3-201ENST00000617619 330 ntBASIC17.67■□□□□ 0.42
SPARCP09486 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
SPARCP09486 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPARCP09486 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
SPARCP09486 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.66■□□□□ 0.42
SPARCP09486 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPARCP09486 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.66■□□□□ 0.42
SPARCP09486 AC026271.2-201ENST00000428091 497 ntBASIC17.66■□□□□ 0.42
SPARCP09486 CYP2T1P-201ENST00000432607 1285 ntBASIC17.66■□□□□ 0.42
SPARCP09486 AC105020.6-201ENST00000621523 1217 ntBASIC17.66■□□□□ 0.42
SPARCP09486 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 AC008694.1-202ENST00000636953 945 ntBASIC17.66■□□□□ 0.42
SPARCP09486 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SPARCP09486 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPARCP09486 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms