Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
OPN1SWP03999 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
OPN1SWP03999 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
OPN1SWP03999 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.55■□□□□ 0.56
OPN1SWP03999 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.55■□□□□ 0.56
OPN1SWP03999 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
OPN1SWP03999 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.55■□□□□ 0.56
OPN1SWP03999 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
OPN1SWP03999 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
OPN1SWP03999 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
OPN1SWP03999 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
OPN1SWP03999 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.54■□□□□ 0.56
OPN1SWP03999 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
OPN1SWP03999 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.54■□□□□ 0.56
OPN1SWP03999 AC034268.1-201ENST00000441047 882 ntBASIC18.54■□□□□ 0.56
OPN1SWP03999 AC013268.1-206ENST00000638368 961 ntBASIC18.54■□□□□ 0.56
OPN1SWP03999 AC112229.1-201ENST00000639295 961 ntBASIC18.54■□□□□ 0.56
OPN1SWP03999 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
OPN1SWP03999 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
OPN1SWP03999 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
OPN1SWP03999 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.53■□□□□ 0.56
OPN1SWP03999 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.53■□□□□ 0.56
OPN1SWP03999 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.53■□□□□ 0.56
OPN1SWP03999 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
OPN1SWP03999 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.53■□□□□ 0.56
OPN1SWP03999 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.53■□□□□ 0.56
OPN1SWP03999 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
OPN1SWP03999 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
OPN1SWP03999 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.53■□□□□ 0.56
OPN1SWP03999 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
OPN1SWP03999 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
OPN1SWP03999 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.52■□□□□ 0.56
OPN1SWP03999 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
OPN1SWP03999 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.52■□□□□ 0.56
OPN1SWP03999 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
OPN1SWP03999 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 AC007322.4-201ENST00000509611 723 ntBASIC18.52■□□□□ 0.56
OPN1SWP03999 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.52■□□□□ 0.56
OPN1SWP03999 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
OPN1SWP03999 AC137761.2-201ENST00000561729 223 ntBASIC18.52■□□□□ 0.56
OPN1SWP03999 AC145350.3-201ENST00000569033 163 ntBASIC18.52■□□□□ 0.56
OPN1SWP03999 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.52■□□□□ 0.56
OPN1SWP03999 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.52■□□□□ 0.56
OPN1SWP03999 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.52■□□□□ 0.56
OPN1SWP03999 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
OPN1SWP03999 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
OPN1SWP03999 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.52■□□□□ 0.56
OPN1SWP03999 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.52■□□□□ 0.56
OPN1SWP03999 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
OPN1SWP03999 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
OPN1SWP03999 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms