Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.83■□□□□ 0.93
APOEP02649 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.83■□□□□ 0.93
APOEP02649 AL031963.3-201ENST00000606441 850 ntBASIC20.83■□□□□ 0.93
APOEP02649 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APOEP02649 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APOEP02649 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
APOEP02649 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APOEP02649 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.83■□□□□ 0.92
APOEP02649 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APOEP02649 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
APOEP02649 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
APOEP02649 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.82■□□□□ 0.92
APOEP02649 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.82■□□□□ 0.92
APOEP02649 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
APOEP02649 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 KRT8P20-201ENST00000423953 1409 ntBASIC20.82■□□□□ 0.92
APOEP02649 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
APOEP02649 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.82■□□□□ 0.92
APOEP02649 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.82■□□□□ 0.92
APOEP02649 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.82■□□□□ 0.92
APOEP02649 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.82■□□□□ 0.92
APOEP02649 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.82■□□□□ 0.92
APOEP02649 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 AC006557.6-201ENST00000623071 864 ntBASIC20.82■□□□□ 0.92
APOEP02649 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.82■□□□□ 0.92
APOEP02649 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
APOEP02649 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.82■□□□□ 0.92
APOEP02649 AL391422.3-201ENST00000603791 2761 ntBASIC20.82■□□□□ 0.92
APOEP02649 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.82■□□□□ 0.92
APOEP02649 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOEP02649 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.81■□□□□ 0.92
APOEP02649 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.81■□□□□ 0.92
APOEP02649 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 ABHD17AP1-201ENST00000358206 933 ntBASIC20.81■□□□□ 0.92
APOEP02649 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
APOEP02649 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.81■□□□□ 0.92
APOEP02649 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.81■□□□□ 0.92
APOEP02649 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
APOEP02649 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOEP02649 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.81■□□□□ 0.92
APOEP02649 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
APOEP02649 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.81■□□□□ 0.92
APOEP02649 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.81■□□□□ 0.92
APOEP02649 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.8■□□□□ 0.92
APOEP02649 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
APOEP02649 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
APOEP02649 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
APOEP02649 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
APOEP02649 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOEP02649 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.79■□□□□ 0.92
APOEP02649 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 KRT8P17-201ENST00000453110 1448 ntBASIC20.79■□□□□ 0.92
APOEP02649 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
APOEP02649 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
APOEP02649 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 AL512408.1-201ENST00000569378 2000 ntBASIC20.79■□□□□ 0.92
APOEP02649 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.79■□□□□ 0.92
APOEP02649 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
APOEP02649 AC008687.6-201ENST00000596318 630 ntBASIC20.79■□□□□ 0.92
APOEP02649 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.79■□□□□ 0.92
APOEP02649 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.79■□□□□ 0.92
APOEP02649 AL162377.1-201ENST00000618844 1793 ntBASIC20.79■□□□□ 0.92
APOEP02649 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOEP02649 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APOEP02649 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOEP02649 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APOEP02649 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APOEP02649 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms