Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
UPK1BO75841 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 OR2I1P-207ENST00000453522 948 ntBASIC17.35■□□□□ 0.37
UPK1BO75841 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1BO75841 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1BO75841 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 MKRN4P-201ENST00000444706 1521 ntBASIC17.35■□□□□ 0.37
UPK1BO75841 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.35■□□□□ 0.37
UPK1BO75841 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.35■□□□□ 0.37
UPK1BO75841 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPK1BO75841 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1BO75841 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1BO75841 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.35■□□□□ 0.37
UPK1BO75841 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UPK1BO75841 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
UPK1BO75841 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UPK1BO75841 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.34■□□□□ 0.37
UPK1BO75841 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UPK1BO75841 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.34■□□□□ 0.37
UPK1BO75841 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UPK1BO75841 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
UPK1BO75841 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.34■□□□□ 0.37
UPK1BO75841 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UPK1BO75841 AC067852.2-201ENST00000590513 2313 ntBASIC17.34■□□□□ 0.37
UPK1BO75841 AC006333.2-201ENST00000607957 2099 ntBASIC17.34■□□□□ 0.37
UPK1BO75841 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1BO75841 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.34■□□□□ 0.37
UPK1BO75841 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPK1BO75841 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1BO75841 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.33■□□□□ 0.37
UPK1BO75841 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1BO75841 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.33■□□□□ 0.37
UPK1BO75841 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.33■□□□□ 0.37
UPK1BO75841 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1BO75841 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1BO75841 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1BO75841 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.33■□□□□ 0.37
UPK1BO75841 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.33■□□□□ 0.37
UPK1BO75841 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.33■□□□□ 0.37
UPK1BO75841 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UPK1BO75841 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1BO75841 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1BO75841 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UPK1BO75841 MIR2861-201ENST00000636310 90 ntBASIC17.33■□□□□ 0.36
UPK1BO75841 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UPK1BO75841 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1BO75841 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1BO75841 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.33■□□□□ 0.36
UPK1BO75841 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1BO75841 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UPK1BO75841 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPK1BO75841 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
UPK1BO75841 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK1BO75841 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UPK1BO75841 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
UPK1BO75841 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
UPK1BO75841 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK1BO75841 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.32■□□□□ 0.36
UPK1BO75841 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
UPK1BO75841 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.32■□□□□ 0.36
UPK1BO75841 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
UPK1BO75841 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UPK1BO75841 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
UPK1BO75841 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 DPP3P2-201ENST00000416030 1696 ntBASIC17.32■□□□□ 0.36
UPK1BO75841 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPK1BO75841 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
UPK1BO75841 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UPK1BO75841 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms