Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN2BO60939 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN2BO60939 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.85■□□□□ 0.61
SCN2BO60939 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN2BO60939 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SCN2BO60939 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.85■□□□□ 0.61
SCN2BO60939 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN2BO60939 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SCN2BO60939 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.85■□□□□ 0.61
SCN2BO60939 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.85■□□□□ 0.61
SCN2BO60939 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN2BO60939 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.85■□□□□ 0.61
SCN2BO60939 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN2BO60939 CYP2T3P-201ENST00000601990 817 ntBASIC18.85■□□□□ 0.61
SCN2BO60939 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.85■□□□□ 0.61
SCN2BO60939 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN2BO60939 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.85■□□□□ 0.61
SCN2BO60939 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN2BO60939 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SCN2BO60939 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCN2BO60939 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN2BO60939 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 AC093484.2-201ENST00000580996 2166 ntBASIC18.84■□□□□ 0.61
SCN2BO60939 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 AC016769.1-201ENST00000409132 1010 ntBASIC18.84■□□□□ 0.61
SCN2BO60939 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN2BO60939 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN2BO60939 AL031963.3-201ENST00000606441 850 ntBASIC18.84■□□□□ 0.61
SCN2BO60939 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCN2BO60939 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
SCN2BO60939 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SCN2BO60939 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.84■□□□□ 0.61
SCN2BO60939 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN2BO60939 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
SCN2BO60939 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN2BO60939 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN2BO60939 AC005332.7-201ENST00000614046 2005 ntBASIC18.83■□□□□ 0.61
SCN2BO60939 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN2BO60939 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.83■□□□□ 0.61
SCN2BO60939 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN2BO60939 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN2BO60939 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
SCN2BO60939 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN2BO60939 CYP2T1P-201ENST00000432607 1285 ntBASIC18.83■□□□□ 0.6
SCN2BO60939 RARRES2P6-201ENST00000567333 442 ntBASIC18.83■□□□□ 0.6
SCN2BO60939 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.83■□□□□ 0.6
SCN2BO60939 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN2BO60939 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN2BO60939 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN2BO60939 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN2BO60939 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN2BO60939 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN2BO60939 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN2BO60939 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCN2BO60939 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN2BO60939 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SCN2BO60939 AL355472.2-201ENST00000422958 438 ntBASIC18.81■□□□□ 0.6
SCN2BO60939 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms