Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.06■□□□□ 0.64
LCMT2O60294 AC120498.8-201ENST00000614275 531 ntBASIC19.06■□□□□ 0.64
LCMT2O60294 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.06■□□□□ 0.64
LCMT2O60294 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
LCMT2O60294 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.05■□□□□ 0.64
LCMT2O60294 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.05■□□□□ 0.64
LCMT2O60294 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LCMT2O60294 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.05■□□□□ 0.64
LCMT2O60294 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.05■□□□□ 0.64
LCMT2O60294 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
LCMT2O60294 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
LCMT2O60294 AC008687.6-201ENST00000596318 630 ntBASIC19.05■□□□□ 0.64
LCMT2O60294 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.05■□□□□ 0.64
LCMT2O60294 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LCMT2O60294 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.04■□□□□ 0.64
LCMT2O60294 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LCMT2O60294 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.04■□□□□ 0.64
LCMT2O60294 RPS2P52-201ENST00000469610 820 ntBASIC19.04■□□□□ 0.64
LCMT2O60294 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.04■□□□□ 0.64
LCMT2O60294 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.04■□□□□ 0.64
LCMT2O60294 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.04■□□□□ 0.64
LCMT2O60294 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LCMT2O60294 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LCMT2O60294 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.03■□□□□ 0.64
LCMT2O60294 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
LCMT2O60294 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LCMT2O60294 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LCMT2O60294 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.03■□□□□ 0.64
LCMT2O60294 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
LCMT2O60294 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
LCMT2O60294 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.03■□□□□ 0.64
LCMT2O60294 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.03■□□□□ 0.64
LCMT2O60294 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.03■□□□□ 0.64
LCMT2O60294 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.03■□□□□ 0.64
LCMT2O60294 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.03■□□□□ 0.64
LCMT2O60294 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.03■□□□□ 0.64
LCMT2O60294 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LCMT2O60294 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LCMT2O60294 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LCMT2O60294 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LCMT2O60294 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.02■□□□□ 0.64
LCMT2O60294 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.02■□□□□ 0.64
LCMT2O60294 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LCMT2O60294 AC026366.1-201ENST00000488803 879 ntBASIC19.02■□□□□ 0.64
LCMT2O60294 AP003097.1-201ENST00000530657 1135 ntBASIC19.02■□□□□ 0.64
LCMT2O60294 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.02■□□□□ 0.64
LCMT2O60294 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.02■□□□□ 0.64
LCMT2O60294 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LCMT2O60294 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LCMT2O60294 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LCMT2O60294 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.02■□□□□ 0.63
LCMT2O60294 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LCMT2O60294 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms