Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PEX1O43933 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PEX1O43933 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PEX1O43933 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PEX1O43933 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PEX1O43933 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.32■□□□□ 0.68
PEX1O43933 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 AC138932.1-201ENST00000534164 6830 ntBASIC19.32■□□□□ 0.68
PEX1O43933 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.32■□□□□ 0.68
PEX1O43933 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.32■□□□□ 0.68
PEX1O43933 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.32■□□□□ 0.68
PEX1O43933 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.32■□□□□ 0.68
PEX1O43933 SLC7A5P2-201ENST00000553010 536 ntBASIC19.32■□□□□ 0.68
PEX1O43933 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.32■□□□□ 0.68
PEX1O43933 AC008175.2-201ENST00000612840 297 ntBASIC19.32■□□□□ 0.68
PEX1O43933 AC010536.3-201ENST00000620306 533 ntBASIC19.32■□□□□ 0.68
PEX1O43933 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.32■□□□□ 0.68
PEX1O43933 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PEX1O43933 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PEX1O43933 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PEX1O43933 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PEX1O43933 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PEX1O43933 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PEX1O43933 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.31■□□□□ 0.68
PEX1O43933 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.31■□□□□ 0.68
PEX1O43933 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.31■□□□□ 0.68
PEX1O43933 SLC7A5P1-201ENST00000568957 537 ntBASIC19.31■□□□□ 0.68
PEX1O43933 AC104771.1-201ENST00000603335 964 ntBASIC19.31■□□□□ 0.68
PEX1O43933 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.31■□□□□ 0.68
PEX1O43933 AL109923.1-201ENST00000618799 583 ntBASIC19.31■□□□□ 0.68
PEX1O43933 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.31■□□□□ 0.68
PEX1O43933 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PEX1O43933 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PEX1O43933 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PEX1O43933 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 GPX1P1-201ENST00000388829 606 ntBASIC19.3■□□□□ 0.68
PEX1O43933 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.3■□□□□ 0.68
PEX1O43933 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.3■□□□□ 0.68
PEX1O43933 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.3■□□□□ 0.68
PEX1O43933 AC005181.1-201ENST00000604782 1256 ntBASIC19.3■□□□□ 0.68
PEX1O43933 AC120498.10-201ENST00000621827 505 ntBASIC19.3■□□□□ 0.68
PEX1O43933 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PEX1O43933 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PEX1O43933 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
PEX1O43933 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.3■□□□□ 0.68
PEX1O43933 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
PEX1O43933 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PEX1O43933 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PEX1O43933 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.29■□□□□ 0.68
PEX1O43933 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 NEFHP1-201ENST00000412845 2629 ntBASIC19.29■□□□□ 0.68
PEX1O43933 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX1O43933 AC005082.1-201ENST00000413042 2259 ntBASIC19.29■□□□□ 0.68
PEX1O43933 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX1O43933 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.29■□□□□ 0.68
PEX1O43933 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
PEX1O43933 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX1O43933 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX1O43933 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
PEX1O43933 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PEX1O43933 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
PEX1O43933 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEX1O43933 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PEX1O43933 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX1O43933 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.28■□□□□ 0.68
PEX1O43933 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.28■□□□□ 0.68
PEX1O43933 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms