Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP2O43734 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.74■□□□□ 0.43
TRAF3IP2O43734 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP2O43734 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.73■□□□□ 0.43
TRAF3IP2O43734 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP2O43734 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.72■□□□□ 0.43
TRAF3IP2O43734 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 AC060766.5-201ENST00000590539 871 ntBASIC17.72■□□□□ 0.43
TRAF3IP2O43734 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP2O43734 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 AFG3L1P-217ENST00000557444 2447 ntBASIC17.71■□□□□ 0.43
TRAF3IP2O43734 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 AC092368.3-202ENST00000574180 1591 ntBASIC17.71■□□□□ 0.43
TRAF3IP2O43734 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 AL390719.1-204ENST00000412397 1219 ntBASIC17.71■□□□□ 0.43
TRAF3IP2O43734 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 TMEM179-206ENST00000616017 1645 ntBASIC17.71■□□□□ 0.43
TRAF3IP2O43734 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF3IP2O43734 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAF3IP2O43734 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms