Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PHGDHO43175 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PHGDHO43175 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.77■□□□□ 0.75
PHGDHO43175 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
PHGDHO43175 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PHGDHO43175 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PHGDHO43175 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PHGDHO43175 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.76■□□□□ 0.75
PHGDHO43175 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PHGDHO43175 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PHGDHO43175 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 AC069236.1-201ENST00000604339 616 ntBASIC19.76■□□□□ 0.75
PHGDHO43175 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PHGDHO43175 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.76■□□□□ 0.75
PHGDHO43175 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.76■□□□□ 0.75
PHGDHO43175 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.76■□□□□ 0.75
PHGDHO43175 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHGDHO43175 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.76■□□□□ 0.75
PHGDHO43175 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
PHGDHO43175 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
PHGDHO43175 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.75■□□□□ 0.75
PHGDHO43175 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.75■□□□□ 0.75
PHGDHO43175 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.75■□□□□ 0.75
PHGDHO43175 AL031963.3-201ENST00000606441 850 ntBASIC19.75■□□□□ 0.75
PHGDHO43175 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.75■□□□□ 0.75
PHGDHO43175 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.75■□□□□ 0.75
PHGDHO43175 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
PHGDHO43175 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PHGDHO43175 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHGDHO43175 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PHGDHO43175 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.74■□□□□ 0.75
PHGDHO43175 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHGDHO43175 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.74■□□□□ 0.75
PHGDHO43175 AC007322.1-201ENST00000426983 750 ntBASIC19.74■□□□□ 0.75
PHGDHO43175 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 AC008694.1-202ENST00000636953 945 ntBASIC19.74■□□□□ 0.75
PHGDHO43175 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
PHGDHO43175 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PHGDHO43175 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PHGDHO43175 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.73■□□□□ 0.75
PHGDHO43175 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.73■□□□□ 0.75
PHGDHO43175 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.73■□□□□ 0.75
PHGDHO43175 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.73■□□□□ 0.75
PHGDHO43175 AC231657.2-201ENST00000624556 255 ntBASIC19.73■□□□□ 0.75
PHGDHO43175 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.73■□□□□ 0.75
PHGDHO43175 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PHGDHO43175 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.73■□□□□ 0.75
PHGDHO43175 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PHGDHO43175 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.73■□□□□ 0.75
PHGDHO43175 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHGDHO43175 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PHGDHO43175 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
PHGDHO43175 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PHGDHO43175 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHGDHO43175 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms