Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHDO14521 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHDO14521 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHDO14521 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SDHDO14521 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.21■□□□□ 0.67
SDHDO14521 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.21■□□□□ 0.67
SDHDO14521 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SDHDO14521 TERF1P5-201ENST00000477545 1207 ntBASIC19.21■□□□□ 0.67
SDHDO14521 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SDHDO14521 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SDHDO14521 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 AC016405.3-201ENST00000607710 860 ntBASIC19.21■□□□□ 0.67
SDHDO14521 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.21■□□□□ 0.67
SDHDO14521 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHDO14521 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHDO14521 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.2■□□□□ 0.66
SDHDO14521 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SDHDO14521 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHDO14521 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
SDHDO14521 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 AL031963.3-201ENST00000606441 850 ntBASIC19.2■□□□□ 0.66
SDHDO14521 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHDO14521 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SDHDO14521 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SDHDO14521 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHDO14521 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.19■□□□□ 0.66
SDHDO14521 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SDHDO14521 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 KRT16P6-202ENST00000425692 1426 ntBASIC19.19■□□□□ 0.66
SDHDO14521 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SDHDO14521 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.19■□□□□ 0.66
SDHDO14521 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.19■□□□□ 0.66
SDHDO14521 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 AC010536.3-201ENST00000620306 533 ntBASIC19.19■□□□□ 0.66
SDHDO14521 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SDHDO14521 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SDHDO14521 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHDO14521 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SDHDO14521 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHDO14521 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.18■□□□□ 0.66
SDHDO14521 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.18■□□□□ 0.66
SDHDO14521 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.18■□□□□ 0.66
SDHDO14521 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHDO14521 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SDHDO14521 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHDO14521 AP001271.2-201ENST00000624018 1556 ntBASIC19.18■□□□□ 0.66
SDHDO14521 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHDO14521 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SDHDO14521 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SDHDO14521 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SDHDO14521 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.17■□□□□ 0.66
SDHDO14521 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.17■□□□□ 0.66
SDHDO14521 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.17■□□□□ 0.66
SDHDO14521 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SDHDO14521 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDHDO14521 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms