Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
O00370 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.22■□□□□ 0.99
O00370 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
O00370 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.22■□□□□ 0.99
O00370 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
O00370 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
O00370 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.21■□□□□ 0.99
O00370 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
O00370 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
O00370 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.21■□□□□ 0.99
O00370 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.21■□□□□ 0.99
O00370 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
O00370 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
O00370 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.21■□□□□ 0.99
O00370 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.21■□□□□ 0.99
O00370 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.21■□□□□ 0.99
O00370 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
O00370 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.21■□□□□ 0.99
O00370 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
O00370 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
O00370 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.2■□□□□ 0.98
O00370 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
O00370 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.2■□□□□ 0.98
O00370 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.2■□□□□ 0.98
O00370 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.2■□□□□ 0.98
O00370 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
O00370 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
O00370 TCF3P1-201ENST00000423021 1937 ntBASIC21.19■□□□□ 0.98
O00370 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.19■□□□□ 0.98
O00370 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.19■□□□□ 0.98
O00370 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.19■□□□□ 0.98
O00370 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
O00370 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 RNA5SP413-201ENST00000516373 109 ntBASIC21.19■□□□□ 0.98
O00370 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
O00370 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
O00370 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.19■□□□□ 0.98
O00370 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
O00370 AL390719.1-204ENST00000412397 1219 ntBASIC21.18■□□□□ 0.98
O00370 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.18■□□□□ 0.98
O00370 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.18■□□□□ 0.98
O00370 AC006557.6-201ENST00000623071 864 ntBASIC21.18■□□□□ 0.98
O00370 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.18■□□□□ 0.98
O00370 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
O00370 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.17■□□□□ 0.98
O00370 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
O00370 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
O00370 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.17■□□□□ 0.98
O00370 UNC93B5-201ENST00000530315 699 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms