Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 ESRRAP1-201ENST00000400596 1257 ntBASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SPDYE4A6NLX3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SPDYE4A6NLX3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
SPDYE4A6NLX3 FZD10-202ENST00000539839 3282 ntBASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 AC005082.1-201ENST00000413042 2259 ntBASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SPDYE4A6NLX3 KRT16P2-201ENST00000414673 1423 ntBASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 TNXA-203ENST00000507684 2038 ntBASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 AC083880.1-201ENST00000608266 535 ntBASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDYE4A6NLX3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 DUSP5P2-201ENST00000426873 1033 ntBASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 AL158047.1-201ENST00000445918 881 ntBASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPDYE4A6NLX3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms