Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.16■□□□□ 0.98
RCCD1A6NED2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.16■□□□□ 0.98
RCCD1A6NED2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.16■□□□□ 0.98
RCCD1A6NED2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.16■□□□□ 0.98
RCCD1A6NED2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.16■□□□□ 0.98
RCCD1A6NED2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RCCD1A6NED2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RCCD1A6NED2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RCCD1A6NED2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RCCD1A6NED2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RCCD1A6NED2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RCCD1A6NED2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RCCD1A6NED2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RCCD1A6NED2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.15■□□□□ 0.98
RCCD1A6NED2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RCCD1A6NED2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RCCD1A6NED2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RCCD1A6NED2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RCCD1A6NED2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
RCCD1A6NED2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.14■□□□□ 0.97
RCCD1A6NED2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RCCD1A6NED2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RCCD1A6NED2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.14■□□□□ 0.97
RCCD1A6NED2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RCCD1A6NED2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RCCD1A6NED2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.13■□□□□ 0.97
RCCD1A6NED2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.13■□□□□ 0.97
RCCD1A6NED2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RCCD1A6NED2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.13■□□□□ 0.97
RCCD1A6NED2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RCCD1A6NED2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RCCD1A6NED2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 NEFHP1-201ENST00000412845 2629 ntBASIC21.12■□□□□ 0.97
RCCD1A6NED2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 AL031963.3-201ENST00000606441 850 ntBASIC21.12■□□□□ 0.97
RCCD1A6NED2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RCCD1A6NED2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RCCD1A6NED2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RCCD1A6NED2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms