Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 KRT16P6-202ENST00000425692 1426 ntBASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 CROCCP5-201ENST00000436658 830 ntBASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 AC087289.5-201ENST00000586076 3175 ntBASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM49BA6NDI0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 AC009237.14-201ENST00000609975 1594 ntBASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 AC105036.2-201ENST00000569468 176 ntBASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM49BA6NDI0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 MKRN4P-201ENST00000444706 1521 ntBASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 AC026185.1-201ENST00000445748 174 ntBASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM49BA6NDI0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
TRIM49BA6NDI0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 LSM12P1-201ENST00000411836 588 ntBASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 AF201337.1-201ENST00000520239 748 ntBASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 AC093484.2-201ENST00000580996 2166 ntBASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM49BA6NDI0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms