Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV5S1A1TA0A578 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 AC133041.1-202ENST00000642053 222 ntBASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV5S1A1TA0A578 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 HLA-L-209ENST00000420110 1011 ntBASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 AC006557.6-201ENST00000623071 864 ntBASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 AC018553.1-201ENST00000616682 1458 ntBASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV5S1A1TA0A578 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 AC060766.5-201ENST00000590539 871 ntBASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV5S1A1TA0A578 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 PNMA6B-201ENST00000538162 1200 ntBASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.77■□□□□ 0.92
TCRBV5S1A1TA0A578 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms