Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV9S1A1TA0A576 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TCRBV9S1A1TA0A576 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV9S1A1TA0A576 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV9S1A1TA0A576 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV9S1A1TA0A576 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TCRBV9S1A1TA0A576 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV9S1A1TA0A576 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 AC034268.1-201ENST00000441047 882 ntBASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 MFSD11-216ENST00000590393 1141 ntBASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 AC105020.6-201ENST00000621523 1217 ntBASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 KRT8P20-201ENST00000423953 1409 ntBASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV9S1A1TA0A576 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 CNN2P6-201ENST00000439038 900 ntBASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 AP001271.2-201ENST00000624018 1556 ntBASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV9S1A1TA0A576 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 AC004408.2-201ENST00000623613 2777 ntBASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TCRBV9S1A1TA0A576 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 AC068338.2-201ENST00000563278 1430 ntBASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBV9S1A1TA0A576 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms