Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 TREX1-205ENST00000625293 1783 ntBASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 KRT16P6-202ENST00000425692 1426 ntBASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00959A0A1B0GUT2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 AC009237.14-201ENST00000609975 1594 ntBASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 BX323043.1-201ENST00000641006 1765 ntBASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 AC100791.3-201ENST00000617619 330 ntBASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00959A0A1B0GUT2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 PTBP1P-201ENST00000554374 1601 ntBASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 AC137761.2-201ENST00000561729 223 ntBASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 AC145350.3-201ENST00000569033 163 ntBASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00959A0A1B0GUT2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 AC005332.7-201ENST00000614046 2005 ntBASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
LINC00959A0A1B0GUT2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 RARRES2P4-201ENST00000514074 484 ntBASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.52□□□□□ -0.25
LINC00959A0A1B0GUT2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms