Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC106739.1-201ENST00000617035 715 ntBASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PBX2P1-201ENST00000493219 1291 ntBASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AL031963.3-201ENST00000606441 850 ntBASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC104187.1-201ENST00000607510 612 ntBASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-1A0A0K0K1D8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AF213884.3-201ENST00000563833 479 ntBASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 AC005082.1-201ENST00000413042 2259 ntBASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-1A0A0K0K1D8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms