Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV5A0A0B4J249 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 AC027612.3-201ENST00000413684 1047 ntBASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 KRT18P20-201ENST00000548986 1279 ntBASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 AC142381.2-201ENST00000566120 298 ntBASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 Z82202.1-201ENST00000623446 1880 ntBASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV5A0A0B4J249 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV5A0A0B4J249 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.41■□□□□ 0.06
TRAV5A0A0B4J249 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms