Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 AL136967.2-201ENST00000623968 743 ntBASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 AC018445.3-201ENST00000624177 1945 ntBASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 AL020996.1-203ENST00000536896 2307 ntBASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 AC125437.2-201ENST00000625180 2167 ntBASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV13-1A0A0B4J241 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV13-1A0A0B4J241 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TRAV13-1A0A0B4J241 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TRAV13-1A0A0B4J241 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV13-1A0A0B4J241 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 AC010141.2-201ENST00000452426 721 ntBASIC13.83□□□□□ -0.2
TRAV13-1A0A0B4J241 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms